The detailed information of tRNA gene sequence


Sequence ID>WENV170021235
Genome IDBBPF01004427
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1879
End posion on genome 1955
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttatcaataT
tRNA gene sequence 
GCGGGTGTAGCTTAGCTGGCTTAAAGCGCCGCCCTGTCACGGCGGAGATCGCCGGTTCAA
ATCCGGTCGCCCGCGTaa
Downstream region at tRNA end position 
aattccgtaa
Secondary structure (Cloverleaf model)
>WENV170021235	Asp	GTC
                   T      GTaa aattccgtaa
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     T G G C C     A
    T C G A        A      + | | | |     A
  G         T T C G       G C C G G     C
  G         | | | |                 T T
  C         A A G C
    T T A          G     AGATC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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