The detailed information of tRNA gene sequence


Sequence ID>WENV170021236
Genome IDBBPF01004427
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 174
End posion on genome 101
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taattattaT
tRNA gene sequence 
CGCGGGGTGGACCAATGGTTAGGTCGGAAGCCTCATAAGCTTTAGAAGCGGGTTCAATTC
CCGCCCCCGCAATta
Downstream region at tRNA end position 
agggttagag
Secondary structure (Cloverleaf model)
>WENV170021236	Met	CAT
                   T      ATta agggttagag
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T T
                    T     C G C C C     A
      T A A        G      | | | | |     A
    G       C C A G       G C G G G     C
    G       | | | |                 T T
    T       G G T C
      T A          G     AGAA
                    G + T
                    A - T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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