The detailed information of tRNA gene sequence


Sequence ID>WENV170021242
Genome IDBBPF01004470
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 6234
End posion on genome 6307
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
tctgtataaa
tRNA gene sequence 
GCCTCTTTAGCTCAGTTGGTAGAGCAGCTGTTTCGTAAACAGCAGGTCGCGGGTTCAAAT
CCCGTGAGAGGCTCtt
Downstream region at tRNA end position 
ttgaaaattc
Secondary structure (Cloverleaf model)
>WENV170021242	Thr	CGT
                   a      TCtt ttgaaaattc
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     T - A
                     T + G          T A
                    T     T G C C C     A
      T G A        A      + | | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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