The detailed information of tRNA gene sequence


Sequence ID>WENV170021249
Genome IDBBPF01004612
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 883
End posion on genome 811
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ttctgaagaa
tRNA gene sequence 
GGGGCAATAGCTCAGTTGGGAGAGCGCTGCGTTCGCATCGCAGAGGTCGGGGGTTCAAAT
CCCCCTTGCTCCAaaa
Downstream region at tRNA end position 
acaaagcaca
Secondary structure (Cloverleaf model)
>WENV170021249	Ala	CGC
                   a      Aaaa acaaagcaca
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     A - T
                     A - T          T A
                    T     C C C C C     A
      T G A        A      | | | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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