The detailed information of tRNA gene sequence


Sequence ID>WENV170021261
Genome IDBBPF01004991
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 5450
End posion on genome 5377
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position
taagtctgtt
tRNA gene sequence
GCCGAGATAGCTCAGTTGGCAGAGCGTGCGCTTGGTAAGCGCAAGGTCCCGGGTTCAATC
CCCGGTCTCGGCTCgc
Downstream region at tRNA end position
gagtttcatt
Secondary structure (Cloverleaf model)
>WENV170021261	Thr	GGT
                   t      TCgc gagtttcatt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          C T
                    T     G G C C C     A
      T G A        A      | | | | |     A
    T       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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