The detailed information of tRNA gene sequence


Sequence ID>WENV170021267
Genome IDBBPF01005020
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1348
End posion on genome 1263
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
nccacaagaa
tRNA gene sequence 
GGAGGGTTGCGATAATGGCTATTCGGCTGGTTTCGAAAACCAGTGGGAGAAATCCCTTGT
AGGTTCGAATCCTGCACCCTCCGCCA
Downstream region at tRNA end position 
gtcaggattt
Secondary structure (Cloverleaf model)
>WENV170021267	Ser	CGA
                   a      GCCA gtcaggattt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C G T C C     A
      T A A        G      | + | | |     G
    G       T A G C       G T A G G     C
    G         | | |                 T T
    C       T T C G
      T A          G     TGGGAGAAATCCCTT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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