The detailed information of tRNA gene sequence


Sequence ID>WENV170021268
Genome IDBBPF01005052
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1298
End posion on genome 1374
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
aaaaaaataa
tRNA gene sequence 
TCCTCCTTAGCTCAGTTGGTTAGAGCACCTGACTGTTAATCAGGGGGTCCTAGGTTCAAG
TCCTAGAGGGGGAGCAA
Downstream region at tRNA end position 
aaggaggtcg
Secondary structure (Cloverleaf model)
>WENV170021268	Asn	GTT
                   a      GCAA aaggaggtcg
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     C - G
                     T - A          T G
                    T     G A T C C     A
      T G A        A      | | | | |     A
    T       C T C G       C T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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