The detailed information of tRNA gene sequence


Sequence ID>WENV170021271
Genome IDBBPF01005149
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 332
End posion on genome 257
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
catgaatagg
tRNA gene sequence 
GCCCTTATCGTCTAGTGGCCAAGGACGTCTGGTTCTCAGCCAGAAAACACCGGTTCAACT
CCGGTTAAGGGCGCAA
Downstream region at tRNA end position 
caatctgact
Secondary structure (Cloverleaf model)
>WENV170021271	Glu	CTC
                   g      GCAA caatctgact
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     T - A
                     A - T          T C
                    T     T G G C C     A
      T G A        C      | | | | |     A
    G       T C T G       A C C G G     C
    G       + | | |                 T T
    C       G G A C
      C A A        G     AAAC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       G
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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