The detailed information of tRNA gene sequence


Sequence ID>WENV170021279
Genome IDBBPF01005323
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1842
End posion on genome 1746
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gactgacagc
tRNA gene sequence 
GGGAGTAGATAGGTTCTGGTGTGCCTTCCGGACTTCAAATCCGTCAGCGGTCGCTAGAAC
AGGCCGCGGTGGGTTCGATTCCCACATGCTCCCGCCA
Downstream region at tRNA end position 
actaagcatc
Secondary structure (Cloverleaf model)
>WENV170021279	SeC(p)	TCA
                   c      GCCA actaagcatc
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     A - T
                     G   A          T T
                    A     C A C C C     A
      T C T        T      | | | | |     G
    G       T G G A       G T G G G     C
    G       + | | |                 T T
    T       G C C T
      G T          T     CAGCGGTCGCTAGAACAGGCCGCG
                    C   T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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