The detailed information of tRNA gene sequence


Sequence ID>WENV170021283
Genome IDBBPF01005390
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1030
End posion on genome 1104
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agtaaagaaa
tRNA gene sequence 
GGGGACGTGGTGAAATGGCTATCATGGAAATCTCCAAAATTTCTGTTTCAGGTTCGAATC
CTGGCGTCCCCGCAA
Downstream region at tRNA end position 
tggaaaactt
Secondary structure (Cloverleaf model)
>WENV170021283	Trp	CCA
                   a      GCAA tggaaaactt
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     G G T C C     A
      T A A        G      + | | | |     G
    G       A G T G       T C A G G     C
    G       | | | +                 T T
    C       T C A T
      T A          G     TGTT
                    G - C
                    A - T
                    A - T
                    A - T
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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