The detailed information of tRNA gene sequence


Sequence ID>WENV170021287
Genome IDBBPF01005477
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 282
End posion on genome 202
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
gaaaatagcc
tRNA gene sequence 
CGGGGCGTGGCCTAGCGGTTTAGGGCGCCAGCATGGGGTGCTGGAGACATTTCGTGGGTT
CGAATCCCACCGCCCCGACCA
Downstream region at tRNA end position 
ttctaaacat
Secondary structure (Cloverleaf model)
>WENV170021287	Pro	GGG
                   c      ACCA ttctaaacat
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       T C C G       G T G G G     C
    G       + | | |                 T T
    T       G G G C
      T T A        G     AGACATTTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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