The detailed information of tRNA gene sequence


Sequence ID>WENV170021306
Genome IDBBPF01005836
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1253
End posion on genome 1180
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggtctatacc
tRNA gene sequence 
GGGAGTTTAGGCAAGTGGTATACTGGCAATCTCCAAAATTGCAGTCGGAGGTTCGATTCC
TCCAACTCCCGCAA
Downstream region at tRNA end position 
cgtacagaac
Secondary structure (Cloverleaf model)
>WENV170021306	Trp	CCA
                   c      GCAA cgtacagaac
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     T - A          T T
                    T     C C T C C     A
        G A        A      | | | | |     G
      T     A C G G       G G A G G     C
      G     |   | +                 T T
      G     T A C T
        T A        G     AGTC
                    G - C
                    C - G
                    A - T
                    A - T
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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