The detailed information of tRNA gene sequence


Sequence ID>WENV170021344
Genome IDBBPF01006598
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1917
End posion on genome 1830
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaagatattt
tRNA gene sequence 
GGAAGGGTGCGTGAGTGGTTTAAACGGCAGTCCTGGAAAGACTGTGTGTCGCAAGGCACC
GCGAGTTCGAATCTCGCCCCTTCCGCCA
Downstream region at tRNA end position 
attaggattt
Secondary structure (Cloverleaf model)
>WENV170021344	Ser	GGA
                   t      GCCA attaggattt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C G C T C     A
      T G A        G      | | | | |     G
    G       G T G C       G C G A G     C
    G         | | |                 T T
    T       A A C G
      T T A        G     TGTGTCGCAAGGCACC
                    C - G
                    A - T
                    G - C
                    T - A
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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