The detailed information of tRNA gene sequence


Sequence ID>WENV170021349
Genome IDBBPF01006846
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1858
End posion on genome 1782
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
accgatatat
tRNA gene sequence
CGCGGGGTGGAGCAGTACGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGTGGGTTCAAA
TCCCTCCCCCGCAACCA
Downstream region at tRNA end position
tttatttaag
Secondary structure (Cloverleaf model)
>WENV170021349	Met	CAT
                   t      ACCA tttatttaag
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      |   | | |     A
    A       C G A G       G T G G G     C
    C       | | | |                 T T
    G       G C T C
      G C A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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