The detailed information of tRNA gene sequence


Sequence ID>WENV170021350
Genome IDBBPF01006846
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1768
End posion on genome 1692
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atttaagttt
tRNA gene sequence 
GGCGGCGTAGCTCAGTTGGTTAGAGCATTCGGTTCATACCCGAAGTGTCGGCGGTTCAAA
TCCGTCCGCCGCTACCA
Downstream region at tRNA end position 
ctagtaaata
Secondary structure (Cloverleaf model)
>WENV170021350	Met	CAT
                   t      ACCA ctagtaaata
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T G C C     A
      T G A        A      | + | | |     A
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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