The detailed information of tRNA gene sequence


Sequence ID>WENV170021355
Genome IDBBPF01007062
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 316
End posion on genome 404
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ccatatttgt
tRNA gene sequence 
GCCGAGGTGGCGAAACTGGCAGACGCAGTAGACTCAAAATCTACCGGGGTTAACACCCCG
TGGGGGTTCAACTCCCCCTCTCGGCACCA
Downstream region at tRNA end position 
ccattatttt
Secondary structure (Cloverleaf model)
>WENV170021355	Leu	CAA
                   t      ACCA ccattatttt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G + T          T C
                    T     C C C C C     A
      C A A        G      | | | | |     A
    T       A G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        A     CGGGGTTAACACCCCGT
                    G - C
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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