The detailed information of tRNA gene sequence


Sequence ID>WENV170021357
Genome IDBBPF01007062
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 230
End posion on genome 140
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttatttaccc
tRNA gene sequence 
GGAGGGGTGTCCGAGTGGTTGATGGTGGCGGTCTTGAAAATCGCTGTGGCCTTACGGGTC
ACCGGGGGTTCGAATCCCTCCCCCTCCGCCA
Downstream region at tRNA end position 
atatattttt
Secondary structure (Cloverleaf model)
>WENV170021357	Ser	TGA
                   c      GCCA atatattttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C T       G G G G G     C
    G       + | |                   T T
    T       T G G T
      T G A        G     TGTGGCCTTACGGGTCACC
                    G - C
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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