The detailed information of tRNA gene sequence


Sequence ID>WENV170021358
Genome IDBBPF01007104
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 479
End posion on genome 406
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tagcaaaaaT
tRNA gene sequence 
GCCGGGGTAGTTCAGTGGTAGAACGTCGCACTCATAAGGCGAAAGTCGTGAGTTCAATTC
TCACTCCCGGCATaa
Downstream region at tRNA end position 
aatgggagcg
Secondary structure (Cloverleaf model)
>WENV170021358	Met	CAT
                   T      ATaa aatgggagcg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T T
                    T     C A C T C     A
        G A        A      | | | | |     A
      T     C T T G       G T G A G     C
      G     | | | |                 T T
      G     G A A C
        T A        G     AAGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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