The detailed information of tRNA gene sequence


Sequence ID>WENV170021379
Genome IDBBPF01007321
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 3863
End posion on genome 3790
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agaactaaaa
tRNA gene sequence 
GGGAGCTTAGTTAAGTGGTATAACTTCGGTCTCCAAAACCGATGTCGGGGGTTCGATTCC
CTCAGCTCCCGCCA
Downstream region at tRNA end position 
attttgtacg
Secondary structure (Cloverleaf model)
>WENV170021379	Trp	CCA
                   a      GCCA attttgtacg
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A          T T
                    T     C T C C C     A
        G A        A      | + | | |     G
      T     A T T G       G G G G G     C
      G     | | | |                 T T
      G     T A A C
        T A        T     TGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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