The detailed information of tRNA gene sequence


Sequence ID>WENV170021390
Genome IDBBPF01008074
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 116
End posion on genome 200
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctttgtaaaa
tRNA gene sequence 
GCCGGGATAGTCTAGTCAGGTAAGGCGTAGGATTCGAAATCCTATGAGCGTCGCTCACCC
TGGGTTCAAATCCCAGTCCCGGCGCtt
Downstream region at tRNA end position 
taattttatt
Secondary structure (Cloverleaf model)
>WENV170021390	Ser	CGA
                   a      GCtt taattttatt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G A C C C     A
      T G A        A      | | | | |     A
    C       T C T G       C T G G G     C
    A       | | + |                 T T
    G       A G G C
      G T A        G     TGAGCGTCGCTCACC
                    T - A
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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