The detailed information of tRNA gene sequence


Sequence ID>WENV170021402
Genome IDBBPF01008921
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 883
End posion on genome 972
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaattactT
tRNA gene sequence 
GGAGAGGTCGGATAACGGTCATTCCAATGGTTTGCTAAACCATGTCGCCTAACAGCGACT
TGTGGGTTCGAATCCCACCCTCTCCGTCA
Downstream region at tRNA end position 
ggtaataaat
Secondary structure (Cloverleaf model)
>WENV170021402	Ser	GCT
                   T      GTCA ggtaataaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C A A        C      | | | | |     G
    G       T A G G       G T G G G     C
    G         | | |                 T T
    T       T T C C
      C A          A     GTCGCCTAACAGCGACTT
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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