The detailed information of tRNA gene sequence


Sequence ID>WENV170021409
Genome IDBBPF01009167
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 797
End posion on genome 870
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
gaggaattaa
tRNA gene sequence 
GGGGCTGTAGGGTAGCCTGGTTATCCTAGGGGACTGGGGGTCCTCTGACTGGAGTTCAAA
TCTCCGCAGCCCCAtcg
Downstream region at tRNA end position 
tgctgttcat
Secondary structure (Cloverleaf model)
>WENV170021409	Pro	GGG
                   a      Atcg tgctgttcat
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     G C C T C     A
      C G A        A      + | | | |     A
    C       T G G G       T G G A G     C
    T       | + | |                 T T
    G       A T C C
      G T T        T     CTGAC
                    A - T
                    G - C
                    G - C
                    G + T
                    G   G
                  A       G
                  C       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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