The detailed information of tRNA gene sequence


Sequence ID>WENV170021417
Genome IDBBPF01009652
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 854
End posion on genome 779
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aatttcagga
tRNA gene sequence 
GCCCCTATCGTCTAGTGGTCTAGGACATCAGGTTTTCATCCTGGAAACCGGGGTTCGATT
CCCCGTGGGGGCGCGA
Downstream region at tRNA end position 
tcatttttat
Secondary structure (Cloverleaf model)
>WENV170021417	Glu	TTC
                   a      GCGA tcatttttat
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     A - T          T T
                    T     G C C C C     A
      T G A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    T       G G A C
      C T A        A     AAAC
                    T + G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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