The detailed information of tRNA gene sequence


Sequence ID>WENV170021419
Genome IDBBPF01009706
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 3234
End posion on genome 3157
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
aagcaagcga
tRNA gene sequence 
CGGGCTGTAGCGCAGTTTGGCTAGCGCGCTTGCTTGGGGTGCAAGAGGTCGCAGGTTCAA
GTCCTGTCAGCCCGACCA
Downstream region at tRNA end position 
tttgttttga
Secondary structure (Cloverleaf model)
>WENV170021419	Pro	GGG
                   a      ACCA tttgttttga
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T G T C C     A
    T T G A        A      + | | | |     A
  T         C G C G       G C A G G     C
  G         | | | |                 T T
  G         G C G C
    C T A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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