The detailed information of tRNA gene sequence


Sequence ID>WENV170021427
Genome IDBBPF01010431
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 559
End posion on genome 482
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
acactcctgc
tRNA gene sequence 
GGCGCCTTCGTCTAGTCCGGTCTAGGACGTAGCCTTCTCAAGGCTAAAACACGGGTTCGA
ATCCCGTAGGCGCTACCA
Downstream region at tRNA end position 
ttcgtcacag
Secondary structure (Cloverleaf model)
>WENV170021427	Glu	CTC
                   c      ACCA ttcgtcacag
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A          T A
                    T     T G C C C     A
    C T G A        C      | | | | |     G
  C         T C T G       A C G G G     C
  G         + | | |                 T T
  G         G G A C
    T C T A        G     AAAC
                    T - A
                    A - T
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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