The detailed information of tRNA gene sequence


Sequence ID>WENV170021428
Genome IDBBPF01010459
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 561
End posion on genome 483
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gaataaaaaa
tRNA gene sequence 
CGGGGTGTAGCGCAGTCCGGTTTAGCGCACCTGCTTTGGGAGCAGGGGGTCGGCGGTTCG
AATCCGCCCACCCCGATCA
Downstream region at tRNA end position 
taggaaactt
Secondary structure (Cloverleaf model)
>WENV170021428	Pro	TGG
                   a      ATCA taggaaactt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C C G C C     A
    C T G A        A      | | | | |     G
  C         C G C G       G G C G G     C
  G         | | | |                 T T
  G         G C G C
    T T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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