The detailed information of tRNA gene sequence


Sequence ID>WENV170021431
Genome IDBBPF01010492
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 275
End posion on genome 202
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ttgcctccgc
tRNA gene sequence 
GCCCGTGTAGCTCAGTCGGTAGAGCACTTCCTTGGTAAGGAAGAGGCCGTCGGTTCGATT
CCGACCGCGGGCTCtt
Downstream region at tRNA end position 
ggatgggagt
Secondary structure (Cloverleaf model)
>WENV170021431	Thr	GGT
                   c      TCtt ggatgggagt
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T + G
                     G - C          T T
                    T     C A G C C     A
      T G A        A      | | | | |     G
    C       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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