The detailed information of tRNA gene sequence


Sequence ID>WENV170021436
Genome IDBBPF01010579
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 130
End posion on genome 54
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttgtcgcta
tRNA gene sequence 
GGCGGCGTAGCTCAGTTGGCCAGAGCATGCGGTTCATACCCGCCAGGTCACTGGTTCAAA
TCCAGTCGCCGCCACCA
Downstream region at tRNA end position 
ttatcgcgcc
Secondary structure (Cloverleaf model)
>WENV170021436	Met	CAT
                   a      ACCA ttatcgcgcc
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      C C A        A     AGGTC
                    T   C
                    G - C
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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