The detailed information of tRNA gene sequence


Sequence ID>WENV170021444
Genome IDBBPF01011213
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 513
End posion on genome 438
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gtgatcgaaa
tRNA gene sequence 
GCCGGCGTAGCTCAACTGGCAGAGCAGCTGATTTGTAATCAGCAGGTTAAGGGTTCGAGT
CCCCTCGTCGGCTCCA
Downstream region at tRNA end position 
gttagtaata
Secondary structure (Cloverleaf model)
>WENV170021444	Thr	TGT
                   a      TCCA gttagtaata
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T
                     C - G
                     G - C          T G
                    T     T C C C C     A
      C A A        A      |   | | |     G
    T       C T C G       A A G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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