The detailed information of tRNA gene sequence


Sequence ID>WENV170021464
Genome IDBBPF01012944
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1723
End posion on genome 1648
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
catcaaaaat
tRNA gene sequence 
GCCGGGGTGGGGTAGGTGGTTATCCTACGGGACTGTGGATCCCGCGACTCGGGTTCGAAT
CTCGGCCCCGGCCCCA
Downstream region at tRNA end position 
ttttnnnnnn
Secondary structure (Cloverleaf model)
>WENV170021464	His	GTG
                   t      CCCA ttttnnnnnn
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C T C     A
      G G A        G      + | | + |     G
    T       T G G G       T C G G G     C
    G         | | +                 T T
    G       T C C T
      T T A        A     CGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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