The detailed information of tRNA gene sequence


Sequence ID>WENV170021488
Genome IDBBPF01014319
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 987
End posion on genome 911
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cattttcatc
tRNA gene sequence 
GGGCCCATAGCTCAGTTGGTCAGAGCGGTCGGCTCATAACCGATTGGTCCTAGGTTCGAG
TCCTAGTGGGCCCACCA
Downstream region at tRNA end position 
atgcaagagg
Secondary structure (Cloverleaf model)
>WENV170021488	Met	CAT
                   c      ACCA atgcaagagg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C T A G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     TGGTC
                    G + T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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