The detailed information of tRNA gene sequence


Sequence ID>WENV170021491
Genome IDBBPF01014724
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 156
End posion on genome 232
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
ttaccaaaat
tRNA gene sequence
GGCGGAGTAGCTCAGTTGGTCAGAGCATGCGGTTCATACCCGCAGTGTCGGGGGTTCAAA
TCCCTCCTCCGCTACCA
Downstream region at tRNA end position
agttagtcgt
Secondary structure (Cloverleaf model)
>WENV170021491	Met	CAT
                   t      ACCA agttagtcgt
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     GTGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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