The detailed information of tRNA gene sequence


Sequence ID>WENV170021503
Genome IDBBPF01015907
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 454
End posion on genome 367
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
aataaaaaaT
tRNA gene sequence 
GCCGAAGTGGCGGAACTGGCAGACGCGGCGGACTCAAAATCCGTTGAGGTTAGCCCCTCG
TGTGGGTTCGACTCCCACCTTCGGCNNnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170021503	Leu	CAA
                   T      NNnn nnnnnnnnnn
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T C
                    T     C A C C C     A
      C A A        G      | | | | |     G
    T       G G C G       G T G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGAGGTTAGCCCCTCGT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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