The detailed information of tRNA gene sequence


Sequence ID>WENV170021514
Genome IDBBPF01017822
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 385
End posion on genome 310
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position
gccaggatgt
tRNA gene sequence
GCCGATGTAGCTCAGCCGGCAGAGCGGCTGATTTGTAATCAGCAGGTCGTGGGTTCGATT
CCCGCCGTCGGCTCCA
Downstream region at tRNA end position
gtagtatttt
Secondary structure (Cloverleaf model)
>WENV170021514	Thr	TGT
                   t      TCCA gtagtatttt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T + G
                     G - C          T T
                    T     C G C C C     A
      C G A        A      | + | | |     G
    C       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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