The detailed information of tRNA gene sequence


Sequence ID>WENV170021520
Genome IDBBPF01018476
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 427
End posion on genome 337
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
tccaactcac
tRNA gene sequence
GGAGGGGTGGGTGAGCGGCCGAAGCCACTGGTCTGGAGAACCAGTGCACCCCCAAAGGGT
GCCGTGGGTTCAAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position
gaacgtcggt
Secondary structure (Cloverleaf model)
>WENV170021520	Ser	GGA
                   c      GCCA gaacgtcggt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G T G G       G T G G G     C
    G         + | |                 T T
    C       A G C C
      C G A        A     TGCACCCCCAAAGGGTGCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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