The detailed information of tRNA gene sequence


Sequence ID>WENV170021537
Genome IDBBPF01022573
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 100
End posion on genome 174
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaaactaat
tRNA gene sequence 
GGGCCCGTAGCTCAGTTGGTTAGAGCAGCTGACTCATAATCAGCGGGTCGGAGGTTCAAC
TCCTTCCGGGCCCACtt
Downstream region at tRNA end position 
tgattggtat
Secondary structure (Cloverleaf model)
>WENV170021537	Met	CAT
                   t      ACtt tgattggtat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T C
                    T     C T T C C     A
      T G A        A      | + | | |     A
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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