The detailed information of tRNA gene sequence


Sequence ID>WENV170021544
Genome IDBBPF01024035
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 43
End posion on genome 119
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
actttttccc
tRNA gene sequence 
GGGCTCTTAGCTCAGTTGGTTAGAGCGTCTGCTTGACGTGCAGAAGGTCAGAGGTTCGAC
TCCTCTAGAGCCCACTA
Downstream region at tRNA end position 
aatcggagat
Secondary structure (Cloverleaf model)
>WENV170021544	Val	GAC
                   c      ACTA aatcggagat
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     T - A          T C
                    T     T C T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       T
                  T       G
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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