The detailed information of tRNA gene sequence


Sequence ID>WENV170021545
Genome IDBBPF01024081
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 602
End posion on genome 528
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
tacccgtatt
tRNA gene sequence 
TCCGGTGTAGCGCAAGGGTAGCGCGGCTGGCTGTTAACCAGTAGGTTGTAGGTTCGAATC
CTACCACCGGAGCGA
Downstream region at tRNA end position 
agtctgaaaa
Secondary structure (Cloverleaf model)
>WENV170021545	Asn	GTT
                   t      GCGA agtctgaaaa
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C A T C C     A
        A A        A      | | | | |     G
      G     C G C G       G T A G G     C
      G     | | | |                 T T
      G     G C G C
        T A        G     AGGTT
                    G + T
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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