The detailed information of tRNA gene sequence


Sequence ID>WENV170021546
Genome IDBBPF01024194
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 176
End posion on genome 99
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tctgctattt
tRNA gene sequence 
GGCCCTGTCGTCTAGCTCGGTTTAGGACGCCAGGTTCTCATCCTGGTAACACGGGTTCAA
ATCCCGTCAGGGCTGCCA
Downstream region at tRNA end position 
tattgaattt
Secondary structure (Cloverleaf model)
>WENV170021546	Glu	CTC
                   t      GCCA tattgaattt
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T G C C C     A
    T C G A        C      | | | | |     A
  C         T C T G       A C G G G     C
  G         + | | |                 T T
  G         G G A C
    T T T A        G     TAAC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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