The detailed information of tRNA gene sequence


Sequence ID>WENV170021547
Genome IDBBPF01024489
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 480
End posion on genome 391
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
tgcaaaaaaa
tRNA gene sequence
GGAGAGATGCAGGAGTGGTTGAACTGGCACGCCTGGAAAGCGTGTGTACGGGCAACCGTA
CCGTGGGTTCGAATCCCACTCTCTCCGCAA
Downstream region at tRNA end position
attataatcc
Secondary structure (Cloverleaf model)
>WENV170021547	Ser	GGA
                   a      GCAA attataatcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G A C       G T G G G     C
    G         | | |                 T T
    T       A C T G
      T G A        G     TGTACGGGCAACCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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