The detailed information of tRNA gene sequence


Sequence ID>WENV170021611
Genome IDBBPG01000378
Search identical group
Phylum/Class[BBPG] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 12112
End posion on genome 12187
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
tttttgtcgg
tRNA gene sequence
CGCGGGGTGGAGCAGTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAGT
CCTGCCCCCGCAACCA
Downstream region at tRNA end position
aaaaaagaca
Secondary structure (Cloverleaf model)
>WENV170021611	Met	CAT
                   g      ACCA aaaaaagaca
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C G T C C     A
      T G A        G      | | | | |     A
    T       C G A G       G C A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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