The detailed information of tRNA gene sequence


Sequence ID>WENV170021656
Genome IDBBPG01000597
Search identical group
Phylum/Class[BBPG] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 24490
End posion on genome 24562
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atagtaaaac
tRNA gene sequence 
GGGGGTGTGGTGTCAATGGTAGCACAACGGTCTCCAAAACCGTTAGTCTAGGTTCGAATC
CTTGCACCCCCGCnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170021656	Trp	CCA
                   c      GCnn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     G T T C C     A
      A A C        G      |   | | |     G
    T       T G T G       C T A G G     C
    G       + | | |                 T T
    G       G C A C
      T A          A     TAGT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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