The detailed information of tRNA gene sequence


Sequence ID>WENV170021675
Genome IDBBPG01000732
Search identical group
Phylum/Class[BBPG] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 9308
End posion on genome 9397
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
tttattgaat
tRNA gene sequence
GGAGAGGTGACTGAGTGGCCGAAAGTGGCACACTGCTAATGTGTTAGAGGGTAAAACCTC
TCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170021675	Ser	GCT
                   t      GCCA nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C A       G A G G G     C
    G         | | |                 T T
    C       A A G T
      C G A        G     TAGAGGGTAAAACCTCTC
                    G + T
                    C - G
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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