The detailed information of tRNA gene sequence


Sequence ID>WENV170021685
Genome IDBBPG01000882
Search identical group
Phylum/Class[BBPG] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 13056
End posion on genome 12968
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttattgtttt
tRNA gene sequence 
GGAGAGGTCGGATAACGGTCATTCCAATGGTTTGCTAAACCATGTCGCCTAACAGCGACT
TGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gtcagaattt
Secondary structure (Cloverleaf model)
>WENV170021685	Ser	GCT
                   t      GCCA gtcagaattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C A A        C      | | | | |     G
    G       T A G G       G T G G G     C
    G         | | |                 T T
    T       T T C C
      C A          A     GTCGCCTAACAGCGACTT
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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