The detailed information of tRNA gene sequence


Sequence ID>WENV170021763
Genome IDBBPG01001701
Search identical group
Phylum/Class[BBPG] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 7866
End posion on genome 7790
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position
agagatttgt
tRNA gene sequence
GGGCACGTAGCTCAGCTGGTTAGAGCGTTACGTTCACATCGTAAAGGCCAATGGTTCGAA
TCCATTCGTGCCCACCA
Downstream region at tRNA end position
taatgaattt
Secondary structure (Cloverleaf model)
>WENV170021763	Val	CAC
                   t      ACCA taatgaattt
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G
                     G - C          T A
                    T     T T A C C     A
      C G A        A      | | | | |     G
    T       C T C G       A A T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    T - A
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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