The detailed information of tRNA gene sequence


Sequence ID>WENV170021778
Genome IDBBPG01001940
Search identical group
Phylum/Class[BBPG] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 3432
End posion on genome 3509
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
accgttgtnn
tRNA gene sequence 
TGCGGGGTGGAGCAGCTTGGTTAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCAA
ATCCTGCCCCCGCTACCA
Downstream region at tRNA end position 
cgctgacgta
Secondary structure (Cloverleaf model)
>WENV170021778	Met	CAT
                   n      ACCA cgctgacgta
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
    T C G A        G      | | | | |     A
  T         C G A G       G C A G G     C
  G         | | | |                 T T
  G         G C T C
    T T A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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