The detailed information of tRNA gene sequence


Sequence ID>WENV170021787
Genome IDBBPG01001995
Search identical group
Phylum/Class[BBPG] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 450
End posion on genome 355
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gggcaagtac
tRNA gene sequence 
GGAGAGATGGCCGAGTCGGTCGAAGGCGGTCGCCTGCTAAGCGATTAAGCGGGACTAAAA
CCTGCTTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tatatttaaa
Secondary structure (Cloverleaf model)
>WENV170021787	Ser	GCT
                   c      GCCA tatatttaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    C T G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  T         A G G C
    C G A          G     TAAGCGGGACTAAAACCTGCTTC
                    G + T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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