The detailed information of tRNA gene sequence


Sequence ID>WENV170021791
Genome IDBBPG01002018
Search identical group
Phylum/Class[BBPG] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2181
End posion on genome 2269
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
tacagatttt
tRNA gene sequence
GGAGAGGTGCTGGAGTGGCCGATCAGGCGCGCCTGGAGAGCGCGTGTCGGATTTTCCGAC
CGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position
gtttaggaac
Secondary structure (Cloverleaf model)
>WENV170021791	Ser	GGA
                   t      GCCA gtttaggaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G T C       G T G G G     C
    G       + | | |                 T T
    C       T C A G
      C G A        G     TGTCGGATTTTCCGACC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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