The detailed information of tRNA gene sequence


Sequence ID>WENV170021866
Genome IDBBPG01003659
Search identical group
Phylum/Class[BBPG] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 4523
End posion on genome 4609
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttagatatat
tRNA gene sequence 
GCCGGGATGGCAGAGCGGACTAACGCGGCAGGCTCGAGACCTGTTGTCTCATTCGAGACA
CTTGGGTTCAAATCCCAATCCCGGCGCtc
Downstream region at tRNA end position 
acttcgtctg
Secondary structure (Cloverleaf model)
>WENV170021866	Ser	CGA
                   t      GCtc acttcgtctg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     A A C C C     A
      C G A        G      | | | | |     A
    G       G A C G       T T G G G     C
    G           | |                 T T
    A       A C G C
      C T A        G     TGTCTCATTCGAGACAC
                    G + T
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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