The detailed information of tRNA gene sequence


Sequence ID>WENV170021904
Genome IDBBPG01004404
Search identical group
Phylum/Class[BBPG] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 12081
End posion on genome 12007
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
agggttgtat
tRNA gene sequence 
GGGGCTGTGGTCGAGCGGTTTAAGATTCCTGACTGTCGATCAGGAGGTCGCGGGTTCAAA
TCCCGTCAGCCCCGCtc
Downstream region at tRNA end position 
gttacttttc
Secondary structure (Cloverleaf model)
>WENV170021904	Asp	GTC
                   t      GCtc gttacttttc
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T G C C C     A
      C G A        G      + | | | |     A
    G       G C T G       G C G G G     C
    G         | | +                 T T
    T       A G A T
      T T A        T     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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